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  3. How to identify your microbial sample: Metagenomic Sequencing, Whole genome sequencing or De Novo Sequencing?

How to identify your microbial sample: Metagenomic Sequencing, Whole genome sequencing or De Novo Sequencing?

Introduction:

Sometimes isolation and cultivation of an individual microbial species is difficult and may be even impossible. With the development of Next Generation Sequencing (NGS) technology, Metagenomic sequencing provides us with a powerful tool to directly study microbial communities in their natural habitat, with a broad range of applications. It’s also exciting to find new species in microbial communities. De Novo Sequencing enables researchers to easily generate reference genome for unrecorded species.

In this webinar, Novogene will offer a comprehensive demonstration of common metagenomic sequencing approaches, including Shotgun Metagenomic Sequencing (SMS), Shallow Shotgun Metagenomic Sequencing (SSMS), Amplicon Metagenomic Sequencing, and how to choose the most appropriate method for your research purpose. In addition to NGS, we will also introduce the application of TGS (long-read sequencing) in metagenomic sequencing, and how to analyze an isolated unknow microbial genome through De Novo sequencing method.

Learning Objectives:
  • Get an overview of microbial sequencing service at Novogene.
  • Learn how to identify the species composition in environmental samples through NGS technology.
  • Distinguish between several different metagenomic approaches.
  • Application of Whole Genome Sequencing (mWGS) and Microbial De Novo Sequencing for isolated microbe samples
Speakers:

Zehua Zhang — Product ManagerNovogene Corporation Inc.

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Services
mRNA SequencingSwift & Express mRNA SequencingTotal RNA SequencingHuman Whole Genome SequencingWhole Exome Sequencing10x Single Cell Gene ExpressionIllumina PIP-seq Single Cell 3’ RNA SequencingSpatial Transcriptomics SequencingWhole Genome Bisulfite Sequencing (WGBS)Quantitative ProteomicsUntargeted MetabolomicsShotgun Metagenomics SequencingMetatranscriptome SequencingSequencing Only on Illumina SequencerSequencing Only on Ultima SequencerFull-Length Transcriptome SequencingChromatin Immunoprecipitation Sequencing (ChIP-seq)
Company
About UsOur LocationsNews & EventsCareers
Contact Us
Contact Us
Service Support
Automated Delivery Platform (Falcon)Bioinformatics Analysis Tool (NovoMagic)Customer Service System (CSS)
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Copyright © 2026 Novogene Corporation Inc. All rights reserved. For Research Use Only.
    • Cart
    • Quote
    • Inquiry
    • Cart
    • Quote
    • Inquiry
Novogene
  • Novogene
  • Genomics
    • Human Whole Genome Sequencing
    • Whole Exome Sequencing
    • Plant and Animal Whole Genome Sequencing
    • Plant and Animal De Novo Sequencing
    • Microbial Whole Genome Sequencing
    • Microbial De Novo Sequencing

    Metagenomics

    • Shotgun Metagenomics Sequencing
    • Amplicon Sequencing

    Transcriptomics

    • mRNA Sequencing
    • Swift & Express mRNA Sequencing New!
    • Full-Length Transcriptome Sequencing
    • Prokaryotic RNA Sequencing
    • Metatranscriptome Sequencing
    • Total RNA Sequencing
    • Small RNA Sequencing (sRNA‑seq)
    • Whole Transcriptome Sequencing

    Single Cell & Spatial Omics

    • 10x Single Cell Gene Expression
    • Illumina PIP-seq Single Cell 3’ RNA Sequencing New!
    • Spatial Transcriptomics Sequencing New!

    Epigenomics

    • Whole Genome Bisulfite Sequencing (WGBS)
    • Enzymatic Methylation Sequencing
    • Directed Methylation Sequencing (DM-Seq) New!
    • RNA Immunoprecipitation Sequencing (RIP-seq)
    • Chromatin Immunoprecipitation Sequencing (ChIP-seq)
    • Cleavage Under Targets & Tagmentation (CUT&Tag) New!
    • Assay for Transposase-Accessible Chromatin with Sequencing (ATAC-seq)
    • Reduced Representation Bisulfite Sequencing (RRBS)

    Proteomics

    • Quantitative Proteomics New!
    • PTM Proteomics New!
    • Olink Proteomics New!

    Metabolomics

    • Untargeted Metabolomics

    Premade Library

    • Sequencing Only on Illumina Sequencer
    • Sequencing Only on Ultima Sequencer
  • PromotionsPromotions
    • Platforms
    • Service & Support
    • Automated Delivery Platform (Falcon)
    • Bioinformatics Analysis Tool (NovoMagic)
    • Customer Service System (CSS)
    • Case Study
    • Blog
    • Webinar
    • Brochure
    • Cancer Research
    • Immuno-oncology
    • Agrigenomics
    • Environment
    • Food Science
    • Human Microbiome
    • Plant and Animal Microbiome
    • Drug Discovery and Development
    • Rare and Complex Diseases
    • About Us
    • Our Locations
    • News & Events
    • Careers
  • Contact UsContact Us
    • mRNA Sequencing
    • Illumina Lane Sequencing
  1. Home
  2. Resources
  3. How to identify your microbial sample: Metagenomic Sequencing, Whole genome sequencing or De Novo Sequencing?

How to identify your microbial sample: Metagenomic Sequencing, Whole genome sequencing or De Novo Sequencing?

Introduction:

Sometimes isolation and cultivation of an individual microbial species is difficult and may be even impossible. With the development of Next Generation Sequencing (NGS) technology, Metagenomic sequencing provides us with a powerful tool to directly study microbial communities in their natural habitat, with a broad range of applications. It’s also exciting to find new species in microbial communities. De Novo Sequencing enables researchers to easily generate reference genome for unrecorded species.

In this webinar, Novogene will offer a comprehensive demonstration of common metagenomic sequencing approaches, including Shotgun Metagenomic Sequencing (SMS), Shallow Shotgun Metagenomic Sequencing (SSMS), Amplicon Metagenomic Sequencing, and how to choose the most appropriate method for your research purpose. In addition to NGS, we will also introduce the application of TGS (long-read sequencing) in metagenomic sequencing, and how to analyze an isolated unknow microbial genome through De Novo sequencing method.

Learning Objectives:
  • Get an overview of microbial sequencing service at Novogene.
  • Learn how to identify the species composition in environmental samples through NGS technology.
  • Distinguish between several different metagenomic approaches.
  • Application of Whole Genome Sequencing (mWGS) and Microbial De Novo Sequencing for isolated microbe samples
Speakers:

Zehua Zhang — Product ManagerNovogene Corporation Inc.

ServicesServices menu

CompanyCompany menu

Contact UsContact Us menu

Service SupportService Support menu

Services
mRNA SequencingSwift & Express mRNA SequencingTotal RNA SequencingHuman Whole Genome SequencingWhole Exome Sequencing10x Single Cell Gene ExpressionIllumina PIP-seq Single Cell 3’ RNA SequencingSpatial Transcriptomics SequencingWhole Genome Bisulfite Sequencing (WGBS)Quantitative ProteomicsUntargeted MetabolomicsShotgun Metagenomics SequencingMetatranscriptome SequencingSequencing Only on Illumina SequencerSequencing Only on Ultima SequencerFull-Length Transcriptome SequencingChromatin Immunoprecipitation Sequencing (ChIP-seq)
Company
About UsOur LocationsNews & EventsCareers
Contact Us
Contact Us
Service Support
Automated Delivery Platform (Falcon)Bioinformatics Analysis Tool (NovoMagic)Customer Service System (CSS)
LinkedInLinkedIn hoverYouTubeYouTube hoverXX hoverMetaMeta hoverInstagramInstagram hover
Copyright © 2026 Novogene Corporation Inc. All rights reserved. For Research Use Only.
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